Cellenics® as a teaching resource
The Biomage-hosted community instance of Cellenics® is available as a free teaching resource for undergraduate and postgraduate students as well as academic researchers.
The tool enables interactive workshops where attendees learn the fundamentals of single-cell RNA-seq analysis methods and gain direct experience using the tool with an example dataset.
The Biomage team has extensive experience in lecturing and running single-cell RNA-seq analysis workshops. We are on hand to provide full teaching and technical support before and during the class.
An example of the workshop exercise slides is available.
How to cite use of the Biomage-hosted instance of Cellenics® in a publication
We suggest including the following statement in your Methods section: "The single cell RNA-seq dataset was processed, explored and visualised using Cellenics® community instance (https://scp.biomage.net/) that’s hosted by Biomage (https://biomage.net/)."
We recommend that you report the processing settings (filtering thresholds, integration method, etc.) that are available for you to download via the 'Download' button in the Data Management module. We can also provide the platform version number - just get in touch with us via the community forum https://community.biomage.net/!
And do keep us up-to-date with your submission and publication - we’d be delighted to hear about (and promote!) your paper!